BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B11LP1|AL430009
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1450 1599 0.0
>3x_Contig1450
Length = 9648
Score = 1599 bits (806), Expect = 0.0
Identities = 830/834 (99%), Gaps = 3/834 (0%)
Strand = Plus / Minus
Query: 3 tgatttgttcaatgacaagatccacacaaacagtagatgcgtcacgcccacaaaagagtt 62
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2597 tgatttgttcaatgacatgatccacacaaacagtagatgcgtcacgcccacaaaagagtt 2538
Query: 63 ggtctacttagcctttgctccgagtaatgtcgaggtggagttcggtgacgatactgttgc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 ggtctacttagcctttgctccgagtaatgtcgaggtggagttcggtgacgatactgttgc 2478
Query: 123 ccagaaagaactcatcgacttaacaactgacgtcgtcgaagaccc-actgatactactcg 181
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2477 ccagaaagaactcatcgacttaacaactgacgtcgtcgaagaccccactgatactactcg 2418
Query: 182 tcacctagcgtcttgtgatgatgatatcataatgtgccagagcccggttgcgctccccga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 tcacctagcgtcttgtgatgatgatatcataatgtgccagagcccggttgcgctccccga 2358
Query: 242 acataaaacatcgtcagaagcaggaacacagcaatattccgtccaagttgctaaaatcag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 acataaaacatcgtcagaagcaggaacacagcaatattccgtccaagttgctaaaatcag 2298
Query: 302 tgcggaccaacttgaaaatacattggagatcggaagacaacaagatgttacagaatgtat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2297 tgcggaccaacttgaaaatacattggagatcggaagacaacaagatgttacagaatgtat 2238
Query: 362 aggtaacgtcttggctcagcttgagattgcttcagaacctttgagcttggaagacgactt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 aggtaacgtcttggctcagcttgagattgcttcagaacctttgagcttggaagacgactt 2178
Query: 422 ggaacagaatgatcttgtcaaacagttgttttacggtagaattaaacaggacttgatacc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 ggaacagaatgatcttgtcaaacagttgttttacggtagaattaaacaggacttgatacc 2118
Query: 482 agtcaatgatgaggcttctgtccggacaaaatatgaaaggtttttatccttattggttaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 agtcaatgatgaggcttctgtccggacaaaatatgaaaggtttttatccttattggttaa 2058
Query: 542 caccggtgaccatccaaaggatatttatgatgctttagatttttactttcagaatgacta 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 caccggtgaccatccaaaggatatttatgatgctttagatttttactttcagaatgacta 1998
Query: 602 tttgaatttggaggagtatggtgatgtaaagagaactgtatctatctcagagttacctgc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1997 tttgaatttggaggagtatggtgatgtaaagagaactgtatctatctcagagtta-ctgc 1939
Query: 662 ggttctacaaattcaaatccagagagtctattatgatagagaaaaattcatgcctttcaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1938 ggttctacaaattcaaatccagagagtctattatgatagagaaaaattcatgcctttcaa 1879
Query: 722 gtctatcgagccgctacctttcggcgaaacgttgtacatggatagatatatggctaccga 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1878 gtctatcgagccgctacctttcggcgaaacgttgtacatggatagatatatggctaccga 1819
Query: 782 ggatcc-aaactattagcagaaattcaacaaaacgcagaattgaaacagaaact 834
|||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1818 ggatccaaaactattagcagaaattcaacaaaacgcagaattgaaacagaaact 1765
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5793
Number of Sequences: 1807
Number of extensions: 5793
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)